Jun 2025 – Present · 1 yr

• Bioinformatics Outsourcing work of Eurofins
• Provided services for Bioinformatics & Developed advanced algorithms with automation for biological interpretation and breakthroughs in genomic analysis.

Jun 2025 – Oct 2025 · 4 mos

• Bioinformatics Guidance and Analysis of NGS data

May 2025 – Present · 1 yr 1 mo · France · Remote

• Spearheaded pipeline dev, automation and containerized projects to deployment, enhancing workflow efficiency in bioinformatics research.
• Developing advanced algorithms for biological interpretation, contributing to significant breakthroughs in genomic analysis.
• Collaborating with cross-functional clients.

Jan 2025 – Present · 1 yr 5 mos

• Projects @ DRY eWorks:
• Apply here to collaborate and work with us: https://lnkd.in/g2sG33wC
• 1. Practical AI and Quantum Computing application in Human Adaptation in Space Exploration
• 2. QNNs in Remote Sensing
• 3. Quantum algorithm development for enhancing Next-Generation Sequencing.[Abstract accepted in QCNS -2024]
• 4. Quantum search algorithm for Maze Problem
• 5. Drug development using QC & XR enhanced virtualization.

Jan 2025 – Apr 2025 · 3 mos · Kerala, India

• Development of Indigenous Robotic Ultrasound for Synchronous Management of Tumor Motion and Radiation Hyperthermia
• At Amrita Vishwa Vidyapeetham, Kollam

Sep 2024 – Sep 2024 · 0 mo

Sep 2024 – Sep 2024 · 0 mo

• Developed algorithm for Maze problem solution in Quantum Computing and optimised using entanglement to find path.

Feb 2024 – Sep 2024 · 7 mos

• My proposal got selected in IEEE QCNS24 :
• Workshop on Quantum Computing for Natural Sciences: Technology and Applications
• Selected as speaker in the Conference.

Sep 2024 – Present · 1 yr 9 mos · EU & India (Bio-Silicon Valley)

• Where Biology meets Silicon Innovations. Focusing on the fusion of biotechnology, silicon technology, AI, NGS, and more.
• Recognised as Top 10 Bioinformatics Companies in India – 2025
• (Issued by India Pharma Outlook Magazine)
• Apply here for our #Services: https://lnkd.in/eU4R3-Qi
• Expertise: NGS, AI and Dug discovery.
• Projects:
• 1. Precision Medicine pipeline development from raw reads to variants to disease classification and targeting epigenetics to bring changes in symptoms.
• 2. Using Machine learning to Predict Peptide Drug Synergies involving Ants Peptides.
• 3. Quantum AI model dev to reduce size and reduce time in training.

Sep 2024 – Jan 2025 · 4 mos · Bengaluru, Karnataka, India

• Cleared the interview for Senior Bioinformatics Engineer but was offered Bioinformatics Engineer position.
• I was on hold but no other alternative was found for 1 month.
• So they had to match my previous salary.
• Got selected based on
• Bioinformatics Project Management skills,
• Full Stack developement,
• AI model development,
• Programming -R, python, perl, java, c++,
• Automation (Nextflow, Snakemke, Slurm)
• Biomedical Informatics
• International work exposure
• After selection as Scientist they offered higher package and change of team. But it wasn't worth my efforts!

Sep 2024 – Sep 2024 · 0 mo

Sep 2024 – Sep 2024 · 0 mo

• Grant Proposal Topic : Novel AI and Machine Learning Approaches for Real-Time EEG Signal Processing in Neurological Disorder Detection

Jul 2024 – Apr 2025 · 9 mos

• #System Design in Game Engine for VR+AR integrating physics involved to reduce development time and cost.
• Tools Used: Maya; Blender; AdobePhotoshop for texturing; UnReal Engine
• Methods: Rigging; Lighting
• Project Work : Enhanced XR Molecular Simulations
• VR Bike Showroom
• Bio-Silicon Labs Virtual Reality Immersion

Jul 2024 – Aug 2024 · 1 mo

• Senior Bioinformatics Engineer
• Cleared the interview but was offered Bioinformatics Engineer position.
• I was on hold but no other alternative was found for 1 month.
• So they had to match my previous salary.
• Got selected based on
• Bioinformatics Project Management skills,
• Full Stack developement,
• AI model development,
• Python (Programming Language),
• Automation (Nextflow, Snakemke, Slurm)
• Biomedical Informatics
• R programming
• Pipeline Development.

Jun 2024 – Jul 2024 · 1 mo

• https://github.com/abhinandan0y/learn-to-develop-ai-model/blob/main/Implementing%20a%20GPT%20model%20from%20Scratch%20To%20Generate%20Text.md

Jun 2024 – Jun 2024 · 0 mo · Remote

• https://github.com/abhinandan0y/QCML/tree/main/IBM_Quantum_Challenge

Apr 2024 – Apr 2024 · 0 mo · Remote

• Completed Classiq's basic workshop on development of Quantum Algorithms with Classiq's high level Qmod language.

Jan 2024 – Jun 2024 · 5 mos

Nov 2023 – Jun 2024 · 7 mos

• #To investigate the potential of circuit-based hybrid QNNs for remote sensing imagery classification.
• I combined quantum neural networks with traditional convolutional neural networks (CNNs) to create a hybrid QNN model. Using the Cirq Google Quantum Computer Simulator, I implemented and tested the hybrid QNN architecture.
• In my initial experiments with classical neural networks, I achieved a validation loss of 2.2502 and a validation accuracy of approximately 16.67%. However, when I implemented the code on a quantum machine, I was able to achieve a validation loss of 2.30 and a validation accuracy of approximately 11%, which substantially a great point to accomplish in quantum niche and to dwell on.
• Moving forward, I plan to investigate alternative model architectures, incorporate additional data sources, and explore transfer learning or ensemble methods to further enhance the classification accuracy of the hybrid QNN model.

Jul 2023 – Sep 2024 · 1 yr 2 mos

• #NGS based Solutions #IaaS & SaaS #GenerativeAI #FPGA
• Bioinformatics Services
• Developed Metagenomics pipeline
• Build ETL / ELT pipelines
• Automation in nextflow
• Containerization & Version control
• Server Setup; Computational Setup for Bioinformatics i.e IT support
• Setting up and running Rosettafold for Structure Prediction
• Developed in-house Project Management software
• AWS : https://github.com/abhinandan0y/PBS-AWS/blob/main/README.md

Jun 2023 – Jun 2023 · 0 mo

• Selected for Bioinformatics Scientist
• Offered 18 lpa***
• But didn't proceeded as I was promised at Progenesis for better package than this within a year.

May 2023 – Jul 2024 · 1 yr 2 mos · California USA /Chennai, Tamil Nadu, India

• #Software development #Researcher #AImodels
• Got appreciation and Incremented to 20% ***
• I didn't left the company when I had offer of 18lpa and was promised of package better than this.
• Which they forgot at the time of increment so I left.
• IVF: Prep pipeline Code and automation of Preimplantation genetic testing for aneuploidy[Trisomy] (PGT-A), PGT for monogenic/single-gene defects (PGT-M), and PGT for chromosomal structural rearrangements[Translocations] (PGT-SR) detection.
• #Automation: Snakemake; Shell Scripting;
• #Containerization: Docker, Kubernetes
• Database development for Autism. Hands-on experience with databases (MongoDb, PostgreSQL)
• #Full Stack development for running pipeline as web application by use of 'Docker' container.
• Assisted in AI models development and feature extraction
• LINUX ADMINISTRATOR:
• #Server Setup; Provided IT support to establish BioInformatics Lab from starting to functional.
• IT Specialist:
• Led the organisation in AWS front how to deploy and manage functionality.
• Used to give resignations after 2-3months, once made Director to resign & get correct recognition of our efforts. Got increments and bonus. If you know your worth you make an environment not working in fake environment.

Jan 2023 – Jan 2023 · 0 mo

• Selected for Senior Bioinformatician
• Offered 7.8 lpa***
• Project Management Skills · RNAseq · Bash · Python (Programming Language) · IaaS · Big Data Analytics · R programming language · Software Development · Shell Scripting · Next-Generation Sequencing (NGS) · Java

Nov 2022 – Jun 2023 · 7 mos · Vienna, Austria · Remote

• Taught BioInformatics and provided understanding of concepts behind bioinformatics tools & softwares.

Oct 2021 – Aug 2022 · 10 mos · Remote

• Guided and provided support for:
• NGS based services
• Developed new methods for visualization in R using ggplot2

Feb 2021 – Nov 2024 · 3 yrs 9 mos

• Provided assistance to many individuals(Msc, PhD, Professors, Directors) from different countries like: Austria, California; and organizations including CSIR, CUH, JNU, also some companies.

Nov 2021 – Dec 2023 · 2 yrs 1 mo

• Bioinformatics Guidance

May 2021 – Apr 2023 · 1 yr 11 mos · Mahendragarh

• #Bioinformatics Engineer
• [NGS data analysis, ML, Molecular Docking & MD Simulation, Full Stack Developer]
• Offered new position in Database development project***
• Resigned 2 times and was asked to join 3rd time in organisation due to my exceptional work and dedication towards research***
• 3 Research papers published as 1st author.
• Guided 3 PhD students through their Bioinformatics work in my lab.
• Guided 4 M.Sc students to complete their Bioinformatics thesis work. They got 1 research article published.
• Guided 1 intern in Bioinformatics Work
• Guided 1 project Fellow Full Stack Development
• Taught NGS data analysis to M.Sc students
• Established Bioinformatics lab in CUH.
• Provided in assistance with reviewing bioinformatics research paper in BioInformatics Lab.
• Guided students with data mining, ETL methods and how to do ML work.
• Athlete[max dist run 50km; Adani Full Marathon 2021, All Inida 16th]

Mar 2021 – Apr 2021 · 1 mo

• Offered Project JRF position***
• Developed a method for creating a scatter plot to overcome R ... library issues as it restricts graph generation methods.

Jan 2021 – Jan 2021 · 0 mo

• Selected for Industry sponsered PhD in CS from University of Greece
• 16S RNA Work in Stremble Company

Jul 2019 – Mar 2021 · 1 yr 8 mos · India

• Award/Recommendations: LOR for PhD
• [Next Generation Sequencing Based Solutions, Big Data Analytics, MD & MS, Machine Learning]
• Exploration of RBP-RNA interactions to reveal the post-transcriptional regulatory impact and development of related tools and resource server" (GAP-0228).
• 1 research paper published as 1st author
• worked on 3 research topics 2 research papers left to be published.
• Athlete[max dist run 36km(Palampur-Dharamshala)], Cricket.

Nov 2018 – Apr 2019 · 5 mos

• I did self study for having base knowledge in NGS. I have analyzed data after gaining knowledge from previous notes and internet to develop bioinformatics pipelines to make analysis process automated and other future technologies. I applied for jobs/fellowships, along-with my CV I attached a progress report made based on NGS learning.
• I scored 9/10 in my interview (because they had nothing else to ask other than full form of CSIR 🤦as last question) and got selected as a Research Fellow(Project Assistant -II) at CSIR-IHBT

Nov 2018 – Apr 2019 · 5 mos

• I studied Artificial intelligence reinforcement learning in python from online resources. How to apply gradient-based supervised machine learning methods to reinforcement learning. Understand and implement different reinforcement learning algorithms(Monte Carlo, TD).

Nov 2018 – Apr 2019 · 5 mos

Jun 2018 – Aug 2018 · 2 mos · India · On-site

• Project Objective: To develop full stack and provide security to EZIMAX software’s using Spring Boot.

Jun 2017 – Aug 2017 · 2 mos · Hybrid

• BIOINFORMATICS INTERN:
• Project Objective: To analyze microarray database for breast cancer. Technologies Used: GEO, ArrayExpress

Nov 2012 – Jan 2013 · 2 mos

• I had done a small project submission for my Biology preboards of high school on "Bioinformatics" database search doc for all genes and there details like chr, position, protiens translated, other sites etc.. for Human Genome, ref to HGP.
• In Chemistry and Physics projects, I worked on generating electricity from used drain out batteries by using salt compotions and series connections.